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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930455.1_cds_XP_016477460.1_69189
CDS Infomation

[gene=LOC107798945] [db_xref=GeneID:107798945] [protein=alpha-galactosidase 3-like] [protein_id=XP_016477460.1] [location=complement(join(31790..31900,32099..32239,33489..33547,33708..33798,34135..34217,34307..34371,34677..34760,34849..34914,34993..35051,35485..35557,35691..35794,35922..35956,36036..36075,36118..36193,36760..36977))] [gbkey=CDS]
Sequence

ATGGCGAAGTCCACTGGCATTCTTGCCACTGCGGCTATGCTTCTTGCTGTTGTGTCTTTG
ACTGTGTTTTTAATGTCAGTGACAGTCACGGCAAGAGAGCTTCCAATTCATCCTTACTTG
AAAATTCAAGAAAGACTCCCCATTTCTCAACTCTATGATACTTCCAATTATGGTGTTCTT
CAAATTGACAATGGCTTAGCTCGAACTCCTCAGATGGGATGGAGTACCTGGAATTTTTTC
GCTTGCAACATAAATGAAACAGTCATCAAGGAAACAGGTAATCCCCCCCCCCCCACTGGT
TTGGCTAGCCTGGGTTATACTTATGTCAACATCGATGATTGTTGGTCAAGATTGACTCGA
GATTTAAAGGGTCAAATGATTCCTGACCCGAAAACTTTTCCATCTGGAATTAAAGCTCTA
GCTGATTATGTGCACTCAAAGGGTCTAAAGCTAGGTGTTTATTCTGATGCTGGGGCTTTT
ACATGTCAAGTTCGACCTGGCTCACTGTTTCATGAAAACAATGATGCTGAACTTTGGGCA
TCTTGGGGTGTTGACTATTTGAAGTACGACAACTGCTTCAATCTAGGCCTCCCACCACAA
AAGAGATACCCGCCCACGCGTGATGCCCTTAATGCTACTGGACGGACTATATTTTATGCA
CTTTGTGAATGGGGTGTCGATGACCCTGCCAAATGGGCTGGAAAAATTGGAAACAGTTGG
CGTACAACAGATGACATCAATGATACATGGGCAAGCATGACAACTATTGCTGATATCAAT
GACAAGTGGGCATCCTATGCTGGACCTGGTGGATGGAACGATCCTGATATGTTAGAGGTT
GGAAATGGGGGCATGAATTACCACGAGTACAAAGGGCACTTTAGCATTTGGGCTTTGATG
AAGGCTCCACTTATTATTGGTTGTGATGTCAGAAACATCACCGCTGAAACTTTAGAAATT
CTTTCCAATAAAGAGGTTATCGCTGTTGACCAAGATCCACTTGGTGTTCAGGGTAGGAGA
GTTTATGCTGCCGGACCAGATGGTTGCGAGCAGGTTTGGGCCGGTCCCTTGTCTGGAAAC
CGTTTGGCTATAGTACTCTGGAACAGATGTTCAAAGGCTGCAACTATTACTGCTAAATGG
GGTGCAATTGGACTACAATCCTCCATCAGCGTCTCTGTGAGAGACTTGTGGAAGCATGAA
GTTGTTTCAGAGAACATGGTGGGTTCATTCAGTGCTCGGGTTGATGCTCATGGCTGTGAA
ATGTACATTTTAACTCCAAAAAGAGCGACTCGAGCTTCAATCTGA

Peptide Sequence

PEP ID

XP_016477460.1
PEP Infomation

PREDICTED: alpha-galactosidase 3-like [Nicotiana tabacum]
Sequence

MAKSTGILATAAMLLAVVSLTVFLMSVTVTARELPIHPYLKIQERLPISQLYDTSNYGVL
QIDNGLARTPQMGWSTWNFFACNINETVIKETGNPPPPTGLASLGYTYVNIDDCWSRLTR
DLKGQMIPDPKTFPSGIKALADYVHSKGLKLGVYSDAGAFTCQVRPGSLFHENNDAELWA
SWGVDYLKYDNCFNLGLPPQKRYPPTRDALNATGRTIFYALCEWGVDDPAKWAGKIGNSW
RTTDDINDTWASMTTIADINDKWASYAGPGGWNDPDMLEVGNGGMNYHEYKGHFSIWALM
KAPLIIGCDVRNITAETLEILSNKEVIAVDQDPLGVQGRRVYAAGPDGCEQVWAGPLSGN
RLAIVLWNRCSKAATITAKWGAIGLQSSISVSVRDLWKHEVVSENMVGSFSARVDAHGCE
MYILTPKRATRASI

Transcript Sequence

Gene sequence data has not been registered.